BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019D11LP1|AL427486
(974 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1155 1839 0.0
>3x_Contig1155
Length = 6106
Score = 1839 bits (926), Expect = 0.0
Identities = 958/966 (99%), Gaps = 3/966 (0%)
Strand = Plus / Plus
Query: 4 gatcttgtttgttgcaattaaacacactctttatacttttctttttcagcggttgtattg 63
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2640 gatcttgtttgttgcaattaaacacactctttatacttgtctttttcagcggttgtattg 2699
Query: 64 gttttgcwamatagttcttgagctttgtaattgtataattaacaactataaatatatata 123
||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2700 gttttgctcctt-gttcttgagctttgtaattgtataattaacaactataaatatatata 2758
Query: 124 tttcaggattcattttcttttatttcattttttttttttgatatttttcaaatttctaaa 183
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2759 tttcaggattcattttcttttatttcattttttttttt-gatatttttcaaatttctaaa 2817
Query: 184 ttttccagtctggagacacattcgcttgataaaaaagccgatgagttgcgaaatcacaac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2818 ttttccagtctggagacacattcgcttgataaaaaagccgatgagttgcgaaatcacaac 2877
Query: 244 aaattctcggctctgtgttacaattttcttcgaggcttatactaggaagcgagcgccaaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2878 aaattctcggctctgtgttacaattttcttcgaggcttatactaggaagcgagcgccaaa 2937
Query: 304 ttttataagtattaaacttgacgatatgttttctgtttcactctttttttctcagttttg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2938 ttttataagtattaaacttgacgatatgttttctgtttcactctttttttctcagttttg 2997
Query: 364 tctatcgaaggttcccgctacttagcagtagtcttatttgaaatgtaaaaaaactatgca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2998 tctatcgaaggttcccgctacttagcagtagtcttatttgaaatgtaaaaaaactatgca 3057
Query: 424 ctgccaatgcgcatcgaaaagacatatattgagcagtaattgaccggtgcttggattcaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3058 ctgccaatgcgcatcgaaaagacatatattgagcagtaattgaccggtgcttggattcaa 3117
Query: 484 attatgtaaggttcgtttttatttttttttacttgacagagagaatgagtggtcaaggac 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3118 attatgtaaggttcgtttttatttttttttacttgacagagagaatgagtggtcaaggac 3177
Query: 544 tcatcaattgaatatatattacataacatacaactaatgcgacaagaagagagtacggaa 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3178 tcatcaattgaatatatattacataacatacaactaatgcgacaagaagagagtacggaa 3237
Query: 604 caattgtaaagaagatctggaaaatcttctttttacatcatttttgggaagtttgttctt 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3238 caattgtaaagaagatctggaaaatcttctttttacatcatttttgggaagtttgttctt 3297
Query: 664 taaagggatgggtgggtactacgagttccgcttatgaagaggaattaacggcgtttgttg 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3298 taaagggatgggtgggtactacgagttccgcttatgaagaggaattaacggcgtttgttg 3357
Query: 724 tttgatttattacgatttttcttctggaaggatttcctgtctggcttaccgacggctgcg 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3358 tttgatttattacgatttttcttctggaaggatttcctgtctggcttaccgacggctgcg 3417
Query: 784 tcgggacccttaccgaatcctagctccttagccaattgggtagacaaatctaaaccgaac 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3418 tcgggacccttaccgaatcctagctccttagccaattgggtagacaaatctaaaccgaac 3477
Query: 844 ttttcaatacggttgatctgcctttgcaagtcatcgatggtagaatcatcttgtccgaat 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3478 ttttcaatacggttgatctgcctttgcaagtcatcgatggtagaatcatcttgtccgaat 3537
Query: 904 ttttcagcacgatagaatttttttctgtaaatggtcaatggccgcttgtttcaattgatc 963
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3538 ttttcagcacgatag-atttttttctgtaaatggtcaatggccgcttgtttcaattgatc 3596
Query: 964 ttgcga 969
||||||
Sbjct: 3597 ttgcga 3602
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 17,423
Number of Sequences: 1807
Number of extensions: 17423
Number of successful extensions: 277
Number of sequences better than 1.0e-20: 1
length of query: 974
length of database: 10,358,551
effective HSP length: 16
effective length of query: 958
effective length of database: 10,329,639
effective search space: 9895794162
effective search space used: 9895794162
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)